PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011101009.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family Dof
Protein Properties Length: 320aa    MW: 34747.2 Da    PI: 8.2913
Description Dof family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011101009.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-Dof125.91.2e-3939100263
          zf-Dof   2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkksss 63 
                     +e+al+cprC+stntkfCyynnyslsqPryfCk+CrryWt+GG+lrn+PvGgg+rknkksss
  XP_011101009.1  39 REQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTAGGSLRNIPVGGGSRKNKKSSS 100
                     6899******************************************************9875 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
ProDomPD0074782.0E-293297IPR003851Zinc finger, Dof-type
PfamPF027011.0E-334197IPR003851Zinc finger, Dof-type
PROSITE profilePS5088429.1614397IPR003851Zinc finger, Dof-type
PROSITE patternPS0136104581IPR003851Zinc finger, Dof-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 320 aa     Download sequence    Send to blast
MDTAQWPQDI VVKPMEEIVT ANTTCPKSSL ERKIGRPQRE QALNCPRCNS TNTKFCYYNN  60
YSLSQPRYFC KTCRRYWTAG GSLRNIPVGG GSRKNKKSSS TSTTTSSSSF TAPSPSPANY  120
TSKKLPDLII PQHQNPKNSA HDTQDLDLGL ISSTANDFKA INELIQVPNF EASKDLQNPC  180
SSSSSDHHHH HHHLSALELL SGITRTGSTR ILNSFPVPIP NSTNHDPNAV NYSSSSSGFS  240
SLTEFNKPPL SFSIDGLGSS SNYGSFVHGV DQESSGKLLF PFQSLKQVSN STNDGGESRD  300
QHGDAGSGYW PNGVIGGGSW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011101009.10.0PREDICTED: dof zinc finger protein DOF1.8-like isoform X1
TrEMBLA0A068UV021e-101A0A068UV02_COFCA; Uncharacterized protein
STRINGVIT_02s0025g02250.t012e-93(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA8824419
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24060.11e-48Dof family protein